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Hello all,
Thanks for this amazing work! Having interactive image browing within a notebook is really something that helps a lot!
I am wondering whether you are planning on adding some other type…
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**NB** This workflow has been moved to https://github.com/IDR/mkngff_upgrade_scripts (main README)
Once a submission has been processed by BioStudies, it will become available at a URL like:
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As an experiment, I tried to see if I could add a remote module to ITKIOOMEZarrNGFF, just by adding a file named "IOOMEZarrNGFF.remote.cmake" to ITK's source subdirectory "Modules\Remote", having:
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Hi,
It seems that writing an image pyramid always uses `nearest` downsampling even if a different method is provided (e.g. `gaussian`):
https://github.com/ome/ome-zarr-py/blob/1f47e59fcda1eb551…
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The spec: https://github.com/ome/ngff
A python library: https://github.com/ome/ome-zarr-py
A viewer: https://github.com/hms-dbmi/vizarr
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It's been there before, not sure how well tested it is
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For http://hms-dbmi.github.io/vizarr?source=https://s3.embl.de/i2k-2020/em-raw.ome.zarr @tischi reported that the browser hangs at this stage:
![Screen Shot 2020-12-03 at 10 05 01](https://user-ima…
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I generated an ome.zarr file using the example image from ome-zarr-py:
https://gist.github.com/constantinpape/69e3cb8e0401621365d814b4d6fda0bc
However, in Windows 10, the file explorer views this …
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Hi there, and thanks for your support.
We (me and @mfranzon) encountered some issues while trying to reproduce the behavior of https://github.com/ome/ome-zarr-py/pull/57#issuecomment-722443138, tha…
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In [working on](https://github.com/ome/ome2024-ngff-challenge/pull/10/files#diff-0819b88eac8c9f0157f79f10ced30229bfa7f809d6e6efece5ae4c276888c7a9R50) converting from OME-Zarr filesets from Zarr v2 to …