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Hi folks,
I stuck on this topic for couple days and seems I need your help to understand what is expected value in TreeExplainer when feature_perturbation = tree_path_dependent, precisely what is e…
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Paper: https://www.nature.com/articles/s41592-023-01938-4
Abstract:
Joint profiling of chromatin accessibility and gene expression in individual cells provides an opportunity to decipher enhancer-d…
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I have seen a few cases where some pertubations of the elastic workflow fail and the elastic tensor is still calculated since `on_missing_references` is set to `NONE`. Due to the fact that `sym_reduce…
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## 🚀 Feature Request
Add a robustness detector to the scan that perturbs numerical values.
The scan should be able to a set of issues that capture the *minimum amount* of perturbation (lying in …
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We are implementing FanPT. The basic idea is in the [recent paper](https://pubs.acs.org/doi/full/10.1021/acs.jpca.4c00855).
Recall that the FanCI equations are
$$
\braket{\mathbf{m}|\hat{H}|\Ps…
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In your paper, you mentioned that you also used the CIC FlowMeter as a feature extractor. But CIC FlowMeter is a flow-based feature extractor, whereas in your current code you are using a packet-based…
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Instead of just having a fixed tidal spinup, use the spin up with all forcing all the way to the point where we start perturbing the track.
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May not want to perturb seeding, may want to keep it fixed! Shouldn't have to specify perturbations if you aren't perturbing it. That's not consistent with other parameters
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Thanks for this interesting method! In`cinemaot_tutorial.ipynb` I noticed that the `ref_label` is set to the treatment **IFNb**.
```
cf, ot, de = co.cinemaot.cinemaot_unweighted(
adata_,
…
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Hi! I want know how to perturb the basic state variables such as temperature, salinity etc. for a specific location in the global 1_deg model.
Thank you!