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### Checklist
- [ ] 1. I have searched related issues but cannot get the expected help.
- [ ] 2. The bug has not been fixed in the latest version.
### Describe the bug
使用lmdeploy lite auto_a…
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`
model_name = "meta-llama/Llama-2-7b-chat-hf"
tokenizer = AutoTokenizer.from_pretrained(model_name, trust_remote_code=True)
model = Model()
model.init(model_name, use_quant=True, weight_dtype="in…
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Dear salmon authors,
While I was using **salmon (v0.11.0, downloaded executable, on a Ubuntu Linux** server) to process a **single-end RNA-seq library**, it reported the following error message:
…
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The 'RNA-seq Data Exploration' notebook covers:
1. Reading in the salmon quant and sample info, including exploring data structure
2. Importing scaled TPM (excercise)
3. Filtering the genes
4. R…
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### Checklist
- [ ] 1. I have searched related issues but cannot get the expected help.
- [ ] 2. The bug has not been fixed in the latest version.
### Describe the bug
model_source: hf_model
WAR…
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### Description of feature
Dear scrnaseq team,
Thank you very much for including simpleaf in `scrnaseq`.
Recently, we made major changes to simpleaf, including adding new features and fixing bu…
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### Checklist
- [X] 1. I have searched related issues but cannot get the expected help.
- [X] 2. The bug has not been fixed in the latest version.
- [X] 3. Please note that if the bug-related issue y…
bltcn updated
2 months ago
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hope additional backend inference support for Exllama. I have tested it, and Exllama is truly fast. Llama2-7b is twice as fast, while Llama2-70b can enhance speed by 50% to 80%.
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Hello, I am using salmon for an RNAseq experiment but I m getting very low mapping rate (0.03%!) and a strong strand bias (0.96). It never happened before and I can not understand the cause. I have al…
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Hello,
Thank you for developing this tool. I am trying to quantify transcript abundance using direct RNA seq reads after mapping with minimap2 to a transcriptome that I got using FLAIR and SQANTI too…