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Hello!
I got to analysing after clearing the startup hiccups of #252.
A succinct summary of the original data set:
- About 380 _Listeria monocytogenes_ strains were sequenced
- The strains we…
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Hi,
Snakemake is also a workflow management system. Snakemake is highly popular, with [>10 new citations per week](https://badge.dimensions.ai/details/id/pub.1018944052). For an introduction, pleas…
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Hi,
I found that there are raw regulons and processed regulons, the **processed regulons** can be loaded through "**decoupleR::get_collectri(organism='human', split_complexes=FALSE)**" and the **r…
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Hi,
how to use binarization.py in jupyter notebook and shell ? I ran
auc_mtx_binary = binarize(auc_mtx,num_workers=15) in jupyter notebook
Some warnings and errors occured:
/home/wangjw/bin/minico…
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@cflerin @s-aibar @bramvds Hi, I finished grn and ctx ,but failed in running aucell. Though this command gave an error, it output a loom file to path to pySCENIC output. How can I solve this proble…
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Hi! I was running scenicplus PBMC 3K tutorial using the singularity container. When I run the following code at the indicated step:
```
from scenicplus.wrappers.run_scenicplus import run_scenicplus
…
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I got unwanted behavior when running with multiple datasets. If one of the datasets is smaller, and thus runs faster, it finishes the make_ref_ranking_dataframe process and make_log_file before anothe…
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Hi,
I have a script that uses multithreading, but the scripts cannot recgonize snakemake and caused an error "NameError: name 'snakemake' is not defined" when running with Snakemake. Not sure it was …
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Hi Team,
Thank you for generating this package! I have a slight issue in regards to the motif nomenclature. I understand that the Motif library has been generated from multiple databases (and …
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https://mp.weixin.qq.com/s/XjVqpSfR-NBN3NkI_cEOGw
ixxmu updated
6 months ago