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This work is being done on Colab, [datatset_get_eyes_on_image_stack.ipynb](https://colab.research.google.com/drive/1ZxzDwD1UdYqhuTxckPLiOUYHin0MZmFQ#scrollTo=hNcoiBaGB_IO).
- [x] Basic MinIP (grays…
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@njmdietrich noticed that contacts were missing in some of the ankyrin structures he was looking at. He gave PDB 3v31 as an example.
From Noah's data, I could see that the contacts were present in …
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Hi Harry,
I've been trying to use the print script on python ,but I can't get the *.contacts output file.
The script runs perfectly fine , but this is all I'm getting :
INFO//15:09:10.727//Progra…
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xxllp updated
5 years ago
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Submitting Author: Matthew K. Lau (@mklau)
Repository: https://github.com/MKLau/rclean
---
- Paste the full DESCRIPTION file inside a code block below:
```
Type: Package
Package: Rclean
…
MKLau updated
4 years ago
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Hello,
I used "curl --silent "ftp://ftp.ebi.ac.uk/pub/databases/msd/sifts/xml/1kf6.xml.gz" | gunzip | python parse_sifts.py" to map PDB to Uniprot. However, the program has not responded. I went …
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```
Traceback (most recent call last):
File "annotate_keypoint.py", line 360, in
bench = load_bench(sixd_base)
File "annotate_keypoint.py", line 73, in load_bench
bench.kpmodels['{:0…
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I have been using SIFTS recently and I have realised that we could use the map of SEQRES and UniProt sequence provided as the alignment, rather than computing it ourselves.
This is particularly im…
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As a user I want accurate, repeatable results when I make my search query.
Feature Tasks:
- [x] Register for API key with Gracenote.
- [x] Look into documentation on Movies Playing in Local Theat…
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Seems related to #151 (
@aggreen ?) somehow, getting it from a run via the web interface.
```
Traceback (most recent call last):
File "/n/groups/marks/software/anaconda_o2/envs/evcouplings_ba…