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Hello,
I had run cMonkey on my dataset while ago without any problem. But seems like I can't manage manage to run it again with slightly different parameters. Could you please help me? Thanks.
B…
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Hello,
I've tried cMonkey2 on my dataset with the following command but it gives me an error that you can see below. Could you please help me with this? Thanks.
./cmonkey.py --organism mtu --ratios …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/MTZimmer/RITANdata
Confirm the following by editi…
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I may have a problem reading the STRING file? I've checked that the file is not empty...
Thanks!
Gates 2016-08-15 14:37:14 ~/gDrive2/projects/TREES-C/PfuEGRIN/src/cmonkeyRuns : cmonkey2 --organism p…
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related to #7
The installation doesn't pick up neither CRAN nor Bioconductor
install.packages("/Users/jurkowsw/apps/ONION/builds/ONION_0.0.1.tar.gz", repos = NULL, type="source", dependencies='TRUE'…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/gibbslab/coexnet
Confirm the following by editing…
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Hi Xiam,
I would really like some support for (MySQL) joins. And I guess to would be nice for Postgres to.
For example:
var Order struct {
Id int64 `db:"id"`
CustomerId int64 `db:"customer_id"`…
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sdanziger@sdanziger-lx:~/Work/BSCM/cmonkey-python$ ./cmonkey.py --organism hal --ratios example_data/hal/halo_ratios5.tsv --num_iterations 2
2015-02-04 17:20:19 INFO checking MEME...
2015-02-04 17…
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I'm running cmonkey2 single thread, but it seems that the parallel version of MEME is failing? I'm not sure, just guessing. Any advice?
Thanks!!!
Gates 2016-08-17 11:24:29 ~/gDrive2/projects/TREES-C…
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> ?existing.CytoscapeWindow
> # RCy3 help window is working
>
> cool4.filt.w Error: could not find function "existing.CytoscapeWindow"
> cool4.filt.w Error: could not find function "existing.Cy…