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Populate with workflows :
https://docs.google.com/spreadsheets/d/1M-e0tpis_YiZ5avCtppifIr1_pvXb7dhDJJoHs7L120/edit?gid=2122588514#gid=2122588514
following completion of DNA-Seq alignments
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The flag `grch37` is used to define the reference genome used during variant calling in the config.
Expected behavior: Define the reference genome per callset and consequently use the correct `ren…
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### Description of the bug
i runned sarek to performe a variant calling with a wrong samle file and the samplesheet was not correctly verified
### Command used and terminal output
```console
nextfl…
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**Issue**
Calling e.g. `AgentPubKey::from_raw_39(bytes)` on something that isn't 39 bytes long causes an assertion failure. This seems surprising seeing as the function returns a `HoloHashResult`, wh…
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At the moment, the core haplotype calling algorithm considers only a collection of explicitly designated SNPs. But there is often rare/cryptic variation at non-target sites within the locus. This thre…
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On our design system we have one particular component which is exposed in the library in multiple components.
This particular component has 10 variants, so i have to use `figma.connect()` 10 times.
…
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What do you get with -v what with -vch?
It is really hard for me to understand to flow of the code.
Can you make it more understandable and user friendly?
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I think the algorithm for variant selection is much too complicated. That is, I think we can structure it in a way that gets the same results, but is not as complicated to explain — _and_ matches a si…
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`TTF_SetFontOutline` always produces rounded outlines, which looks great for most fonts, but not for pixel art fonts. Here is an example:
![image](https://github.com/user-attachments/assets/ab7064bb-…
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Hello,
I am running one of the most basic commands, found on the lumpy webpage:
lumpyexpress -B my.bam -S my.splitters.bam -D my.discordants.bam -o output.vcf
to call copy number variants.
One of …