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## Related tickets and mockup
- Improve annotation column: https://github.com/cBioPortal/cbioportal/issues/8522
- Grouped columns in mutations table: https://github.com/cBioPortal/icebox/issues/189
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In MSK-IMPACT Cohort:
- [ ] Archer results are currently shown as a separate record on the [Patient view](https://cbioportal.mskcc.org/patient?studyId=mskimpact&caseId=P-0037751). Should we leverag…
inodb updated
6 months ago
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Add more columns to data_clinical.txt, using http://oncotree.mskcc.org/cdd/api/ to standardize column names if possible.
- [ ] `MOUSE_CONTAMINATION` - For batches with at least 1 PDX sample, report…
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This is the console error message: `Uncaught TypeError: _jspdfYworks.jsPDF is not a constructor`. This should probably be fixed in the `cbioportal-frontend-commons` library.
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Would be nice to have automated tests for changes in this repo, e.g. when upgrading to a new version of cBioPortal or Keycloak.
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Would be good to have `db.use_ssl=true` in our portal.properties. See https://github.com/thehyve/cbioportal-docker/blob/master/portal.properties#L14
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Filing this as follow up to cBioPortal/cbioportal#8753. There were several issues with this roll out. Let's use next migration as an incentive to improve
- [ ] Improve documentation on a migration …
inodb updated
6 months ago
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![image](https://github.com/cBioPortal/cbioportal/assets/186521/672b1e55-f19b-4bfd-9ac5-e4d52cb43c7a)
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Snyk reported a critical vulnerability in the cbioportal-frontend repository.
```
parse-url Server-side Request Forgery (SSRF)
```
This can be fixed by upgrading parse-url to version 6.0.1 or high…
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PDB changed its endpoint for serving PDB data from http://www.rcsb.org/pdb/files/ to http://files.rcsb.org/view/ . See also https://github.com/cBioPortal/cbioportal/pull/1434.
So it would be good to…