-
the script should live in: `scripts/calculate_Neff.py`
Once HHblits is completed we need to calculate the effective family size from `a3m` file.
N_eff = N_clu(%) / sqrt(N_aa)
depending on N_eff…
-
Let's try to generate optimized GEMM kernel for Hybrid FC(https://github.com/Samsung/ONE/issues/5950). Note that Hybrid FC exploits `(int8*int8) -> int32` type GEMM kernel.
- TVM(partially done by…
-
## User story
>As a curator
>I want the post uploadscript to work as expected
>So that I can use it
## Acceptance criteria
>Given I have uploaded a dataset using the upload script
>Whe…
-
This is an idea from @robert-haas on a discord channel.
The original moses created combo trees out of the arithmetic ops (plus, minus, times, divide) the boolean ops (and/or/not) and a few others (…
-
Implementing jSO algorithm to existing library.
-
Hi,
I sequenced a genome and I got 16 paired-end libraries. To test the speed of the program, I picked on library ~11 Gb each .gz file, and used the following code:
./lighter -r A-407_1.fq.gz -r A…
-
So, we want to make Synaptic more mature.
I've created a design draft to think on it.
https://github.com/cazala/synaptic/wiki/Design-draft:-2.x-API
Let's discuss.
The most significant changes in de…
-
Hi Remco,
I would enjoy an example that uses NS in which a change of epsilon would have an effect, because whatever I do ([example here](https://github.com/richelbilderbeek/razzo/issues/242)), I ca…
-
Hi Eric--
I was wondering if you could help me understand a couple of options in Rphylopars --
mainly, what is the difference between these two models?
lets say trait_data is a multivariate t…
-
# The Omnimeme: A Holistic AI Ecosystem
Envision the Omnimeme - a self-evolving, multidimensional linguistic entity that transcends traditional boundaries of AI, language, and consciousness. This c…