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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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Hi Uni-Dock Team,
I've recently been using Uni-Dock for molecular docking and encountered an error when working with larger ligands. Specifically, I received an error message suggesting that my l…
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**Submitting author:** @mpds (Matheus Müller Pereira da Silva)
**Repository:** https://github.com/gmmsb-lncc/docktgrid
**Branch with paper.md** (empty if default branch): joss
**Version:** v0.0.2
**Ed…
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Hello, I'm quite excited about the QCG algorithm in CREST. I'm trying to use it to generate clusters of bare alkali cations (Li+, Na+, etc.) solvated with approximately 20 water molecules. Despite the…
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DgraphDTA results greatly outperforms the molecular docking baseline, this indicates that Vina was not set up correctly or that it is not a powerful enough system to calculate scores from.
To impro…
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Because the `conda` version of crest has not been updated since #139, I have recently compiled crest to overcome issues I experienced with the QCG functionality similar to #135. To test crest I tried …
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### Checks
- [X] I have searched **[the docs](https://greene-lab.gitbook.io/lab-website-template-docs)**, [existing issues](https://github.com/greenelab/lab-website-template/issues), and [existing di…
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### This issue is a placeholder for a discussion related to the bio.tools COVID-19 related tools list.
https://covid-19.bio.tools
**What are the tools relevant to COVID-19?**
How can we best ke…
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Hi, very interesting model. But here are a few suggestions from us drug design developers:
1) If you want to compare your model with traditional docking methods, e.g. Glide, Smina, Vina, etc, you sho…
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In regards to the `src/run_docking` code responsible for running molecular docking, I have come across a concept that I find a bit perplexing. It appears that a Uniprot_ID is associated with both a li…