-
```
Peptide summary tab hangs and shows no results. I tried it with the file
attached.
Regards,
Pieter.
```
Original issue reported on code.google.com by `pieterlu...@gmail.com` on 1 Aug 2012 at 8…
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Hello,
I was wondering if I can use AutoDock-Vina for docking between proteins and peptides.If not, do you have other suggestions?
Best Regards
Soodabeh
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Right now, all metadata for a predicted peptide appears in the output FASTA ID. @keithchev suggested to dump everything other than the id and peptide index into the description field using space-separ…
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Hello everyone,
I am using DIA-NN to analyze ultralow sample data acquired with diaPASEF and VistaScan modes from timsTOF Ultra 2.
Multiple peptides of interest fall outside of the fragmentation win…
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Short self-assembling peptides, e.g. Stickysven sequence (IKYLSVN) – Kyle works with it. It's derived from a beta sheet in the Prx doughnut. Could be one option for a sequence with side chains groups …
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- [ ] 1. Validation of Crosslinking MzIdentML (mzID) files.
- [ ] a. Validate files of a given folder(Input will be file path)
- [ ] b. Multiple MzIdentML files
- [ ] c. Individual MzIde…
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### PXD001819 Analysis
Currently, we have a workflow that can perform peptide identification using: `-> ms2rescore -> SNR + spectrum properties -> percolator`
Here the results can be found (http…
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Thanks again for this awesome work.
I am wondering if there is something wrong in principle in trying to optimize large molecules like peptides using Delete.
I would like to start with the protein…
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Hi,
I need decoys to run the protein quantification tool Triqler. Is there a way to get DIA-NN to output the decoy peptides?
Best,
Patrick
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Dear MVP developer team,
Thank you very much for this great software. I am excited to test it for our HLA peptidome data. The published reports look fantastic. I don't think it is possible to downlo…