smith-chem-wisc FlashLFQ issues

smith-chem-wisc / FlashLFQ

Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics

GNU Lesser General Public License v3.0

19 stars 15 forks source link

issues

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output file header

#142 sdgroeve opened 3 months ago
0
Error while parsing mzMLs converted from tdf

#141 Cajac102 closed 5 months ago
7
Get LFQ Values for fractionated data at protein level

#140 bressin opened 5 months ago
6
Update README.md

#139 trishorts opened 7 months ago
0
Update to mzlib545

#138 trishorts closed 7 months ago
0
Update to mzlib544

#137 trishorts closed 7 months ago
1
mzlib 543 update

#136 trishorts closed 7 months ago
0
Remove extra tab from header

#135 trishorts closed 7 months ago
0
Header of output file(s)

#134 veitveit opened 7 months ago
2
Could not run in Mac OS 13.6

#133 trinhxt opened 8 months ago
0
mzML quant error : Index was outside the bounds of the array.

#132 patrick-willems opened 8 months ago
8
Update to mz lib541

#131 trishorts closed 9 months ago
0
update to mzlib 539

#130 trishorts closed 9 months ago
0
Shared peptide quantification

#129 rsalz opened 1 year ago
0
added byonic filename from header

#128 trishorts opened 1 year ago
0
Problem with file name excluding format extension

#127 ClaSofMag opened 1 year ago
5
No Posterior Error Probability in Bayesian Protein Fold Change Analysis in Command Line tool

#126 Angad-Exinous opened 1 year ago
0
Question about using with PeptideShaker

#125 justmpm opened 1 year ago
3
Enquiry on where the actual namespace for FlashLFQ exists

#124 acquayefrank closed 1 year ago
2
crashed - invalid parametrization for the distribution

#123 rsalz closed 1 year ago
6
Question about quantification

#122 lazear closed 1 year ago
0
will/does it support timsTOF data?

#121 PatrickvanZalm closed 1 year ago
1
extra trailing tab in output

#120 jvolkening closed 1 year ago
1
alls well

#119 trishorts closed 1 year ago
0
mzlib update to fix filename mismatch and failure to load ids

#118 trishorts closed 1 year ago
0
enable pep prefilter if available

#117 trishorts opened 1 year ago
0
Lower number of isotopes required to 1 but leave default at 2

#116 trishorts opened 1 year ago
0
Parallel Identification Reading and Relaxed file naming in input psms list

#115 trishorts closed 1 year ago
1
FlashLFQ crashed

#114 NiliTicko opened 1 year ago
1
setting up license on linux

#113 wsnoble closed 2 years ago
2
Skip empty mzml scans no error reporting

#112 trishorts closed 2 years ago
1
Allow any string as protein name

#111 trishorts closed 2 years ago
1
update to Net6 and mzlib 528

#110 trishorts closed 2 years ago
10
FlashLFQ normalization issue

#109 shrivastavabhishek closed 2 years ago
8
Support for more conditions

#108 rsalz closed 2 years ago
0
Add bioconda badges

#107 acesnik closed 2 years ago
0
RT alignment?

#106 jvolkening closed 2 years ago
2
Advice on parameter setting

#105 wsnoble closed 2 years ago
10
percolator output compatibilty

#104 trishorts closed 2 years ago
2
Support for Percolator output files

#103 wsnoble opened 2 years ago
77
Duplicated column names in BayesianFoldChangeAnalysis.tsv

#102 MKoesters opened 2 years ago
0
update to .net 5, update mzLib

#101 rmillikin closed 3 years ago
0
Updating mzLib, net5.0, and x64 builds

#100 acesnik closed 3 years ago
1
Commandline version dependent on Microsoft.WindowsDesktop.App Framework

#99 acesnik closed 2 years ago
13
Questions about the generic input format

#98 wfondrie closed 3 years ago
3
Fail in the command-line mode

#97 cksakura opened 3 years ago
2
Add Version information to "About" tab

#96 trishorts opened 3 years ago
0
add reset button

#95 trishorts opened 3 years ago
0
settings, toml, prose

#94 trishorts opened 3 years ago
2
SILAC quantification task crashing

#93 lindsaypino opened 3 years ago
7