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smith-chem-wisc
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FlashLFQ
Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
GNU Lesser General Public License v3.0
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settings, toml, prose
#94
trishorts
opened
3 years ago
2
SILAC quantification task crashing
#93
lindsaypino
opened
3 years ago
7
mass calibrated mzML or Thermo raw files
#92
MSCypher
opened
3 years ago
0
FlashLFQ: psm missing information?
#91
CarlosHorro
opened
4 years ago
0
Crash after/during Bayesian protein quant
#90
StSchulze
closed
4 years ago
6
software threw 2 samples from quant
#89
Dmorgen
opened
4 years ago
3
File uploads for wiki
#88
rmillikin
closed
4 years ago
1
Baysian quantification crashed.
#87
Dmorgen
opened
4 years ago
1
How to quantify cross-linked data?
#86
Dmorgen
opened
4 years ago
2
Option for paired samples for Bayesian protein quant
#85
rmillikin
opened
4 years ago
0
Enable quantifiedPeptides.tsv input
#84
leahvschaffer
opened
4 years ago
0
Add column with # of quantified peptides to output
#83
leahvschaffer
opened
4 years ago
0
Zip file missing CMD.exe
#82
dpryan79
closed
4 years ago
2
An assembly specified in the application dependencies manifest (CMD.deps.json) was not found
#81
ijmiller2
closed
4 years ago
6
New input formats
#80
rmillikin
opened
4 years ago
2
quantification of glycopeptides with multiple peaks
#79
Dmorgen
closed
4 years ago
7
Crash with header / PSM identification issues
#78
Dmorgen
closed
4 years ago
3
Undetermined issue with peak detection?
#77
Dmorgen
closed
4 years ago
1
How important is the base sequence format?
#76
Dmorgen
closed
4 years ago
4
format input to allow pfind results
#75
trishorts
closed
4 years ago
1
Add TMT, iTRAQ, diLeu support
#74
trishorts
opened
5 years ago
2
code style; update mzLib
#73
rmillikin
closed
5 years ago
0
help printed twice on Linux
#72
jvolkening
closed
4 years ago
5
linux absolute paths don't work
#71
jvolkening
closed
4 years ago
3
numpress?
#70
jvolkening
opened
5 years ago
3
fix accord in CMD
#69
rmillikin
closed
5 years ago
0
fix cmd
#68
rmillikin
closed
5 years ago
0
normalization in command-line; advanced protein quant in GUI and comm…
#67
rmillikin
closed
5 years ago
0
correctly skip decoys in PSM reader
#66
rmillikin
closed
6 years ago
0
fix protein reading
#65
rmillikin
closed
6 years ago
0
fixed some bugs in GUI+normalization
#64
rmillikin
closed
6 years ago
0
rename CMD
#63
rmillikin
closed
6 years ago
0
update unit test
#62
rmillikin
closed
6 years ago
0
GUI
#61
rmillikin
closed
6 years ago
0
Merge pull request #5 from smith-chem-wisc/master
#60
rmillikin
closed
6 years ago
0
Question about protein quantitative inference
#59
yishai99
closed
4 years ago
3
run crashes at the end
#58
Dmorgen
closed
4 years ago
1
Caution messafe in running
#57
Dmorgen
closed
4 years ago
8
Unkown psm file error
#56
Dmorgen
closed
6 years ago
4
read .mzID
#55
trishorts
closed
4 years ago
1
format of modifications on the sequence
#54
Dmorgen
closed
4 years ago
4
multiple ID files
#53
Dmorgen
opened
6 years ago
12
peptide quantification and rop-down quantification
#52
Dmorgen
closed
4 years ago
7
informative error when PSM with same sequence and different mass occu…
#51
rmillikin
closed
6 years ago
0
error msg change
#50
rmillikin
closed
6 years ago
0
create output dir if it does not exist
#49
rmillikin
closed
6 years ago
0
error message for no PSM found
#48
rmillikin
closed
6 years ago
0
sample vignette for testing operation
#47
trishorts
closed
4 years ago
1
Issue Running with .mzML file
#46
danielgeiszler
closed
4 years ago
6
update
#45
rmillikin
closed
6 years ago
0
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