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We have been trying to connect to #Enrichr using R, but giving error last two days. It says "EnrichR website not responding".
> library(enrichR)
> dbs
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The survey feedback is very limited but from what I recall (and one comment in survey) the hands-on session was the only real issue. Some changes to consider:
- Provide more example datasets to choos…
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Hi Liam
Harley and I are looking onto phospho and proteomics datasets and have suggestions. Not sure how practical/easy/impossible to do... happy to chat further!
ISSUES
- p values values show up a…
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The proposal that came out of #1773 regarding curating extracellular matrix proteins from proteomics experiments is detailed below.
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I have been downloading transcriptomics and proteomics for all the cancers available and have noticed a few issues (I am running these python commands in R markdown):
1) I am noticing the transcrip…
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CCRCC cancer proteomics data do not have normal tissue type in your latest cptac data
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/computproteomics/PolySTest
Confirm the following …
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## New feature
Nextflow should allow processes to print anything that the process prints to stdout to current stdout. **in real time**.
Currently, `echo true` only prints anything that was printed…
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User suggested adding a checkbox option to the dataset table to group/filter and compare datasets based on specific disease/study such as clinical samples or plasma proteomics.
Ideally, those highl…
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Hello and thanks for developing MS-DAP! I am using the latest version of FragPipe to search and quantify DDA data. There have been some changes made in later versions of this software which affect o…