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Commonly requested and could include links for tutorials on python, R, single cell analysis, etc. Could incorporate into office hours page or as a separate page. @oligomyeggo
Some ideas for single…
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We don't have a page on the Galaxy Community Hub yet:
https://galaxyproject.org/community/sig
We can take inspiration from the microGalaxy community: https://galaxyproject.org/community/sig/microbia…
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Reproducible computational environments for research
- Virtual environments, docker, git
Neural data handling and preprocessing
- Spiking data
- LFP
- Calcium imaging
- Widefield imaging
Single c…
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Thanks you for developing snapATAC tools,
and i have a question:
I followed the "Integrative Analysis of PBMC scATAC-seq and scRNA-seq" pipeline.
1. drawing the prediction score in histogram…
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### Is your feature related to a problem?
In one of my samples, wf-single-cell fails to correctly find the cutoff in the knee plot and returns an excessive large number of cells. Consequently, when l…
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Project Title: Systematic comparative analysis of single cell RNA-sequencing methodsProject UUID: 88ec040b-8705-4f77-8f41-f81e57632f7dWrangler/s: Chris,,Villarreal; William,G,Sullivan; Parisa,,Nejad; …
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Project Title: Systematic comparative analysis of single cell RNA-sequencing methodsProject Short Name: scRNAseqSystemicComparisonProject UUID: 88ec040b-8705-4f77-8f41-f81e57632f7dWrangler/s: Chris,,V…
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### Project short name:
SkinDiabeticUlcers
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1i0S3F4BVG1FIpOi…
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### Project short name:
MerfishCorticalLayer
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files:
* Google Drive:
* Publication: [Spatial Single-cell Analysis Decodes Cortical L…
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Hi,
Can we perform gene imputation using cell2location ? (This is what can do with Tangram)