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Hello,
Thanks for developing DIA-NN.
We have a questions regarding the RT prediction accuracy. In some samples we observed much higher "median RT prediction accuracy" compared to other samples o…
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Dear Vadim,
I would have some questions about the Quantity.Quality.
In a previous discussion (https://github.com/vdemichev/DiaNN/discussions/764), you explained this parameter can filter the precu…
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I have noticed there is a considerable overhead when using `handler_cli`. For example,
```r
f sessionInfo()
R version 4.3.2 (2023-10-31)
Platform: aarch64-apple-darwin22.6.0 (64-bit)
Running un…
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Hi,
Is there a specific way to query an LC-MS file with All Ion Fragmentation (AIF) MS2 with massQL?
If yes can you give me an example?
Or should i use query like that one even if my MSMS are t…
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### Basic information
* My operating system: Windows 10
* My MZmine version: 3.9.0
### What happened
I am processing a dataset of ~300 samples (LC-MS/MS DDA) on a workstation with 128GB RAM.…
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Hi All,In the LC-MS Analysis of Isoaspartylated Peptides part of the PXD006112 project, the experiment uses a mixture of 12 peptides to conduct the experiment, so Organization、 Organization part, etc.…
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### Issue Type
Others
### Search for existing issues similar to yours
Yes
### Kuscia Version
kuscia 0.5.0
### Link to Relevant Documentation
_No response_
### Question Details
```shell
我使用doc…
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A couple to-dos:
- [ ] Fix broken links in the procedure documents in this repo. We need to go through all the procedures and make sure the links point to the appropriate document (right now lots of …
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### Go version
go version go1.22.5 darwin/arm64
### Output of `go env` in your module/workspace:
```shell
GO111MODULE=''
GOARCH='arm64'
GOBIN=''
GOCACHE='/Users/torarne/Library/Caches/go-…
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Hello,
I had QE data which I wanted to extract MS2 information from. I tried to do so by `featureSpectra(xdata)` where `xdata` was an XcmsExperiment object I got by going through LC-MS preprocessin…