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Hi,I have a few problems, hope to get your help.
my command is :
./toga.py /home/TOGAInput/query/hg38.H.g.final.chain /home/TOGAInput/human_hg38/toga.transcripts.bed /home/TOGA/hg38.2bit /home/TOG…
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* Test qcloud2-pipeline at the new VM proteomics@proteomics-qc.hpc.crg.es
* https://dokuwiki.linux.crg.es/doku.php?id=sit:nextflow_on_new_cluster
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### Lesson Title
Introduction to Bioinformatics workflows with Nextflow and nf-core
### Lesson Repository URL
https://github.com/carpentries-incubator/workflows-nextflow
### Lesson Website URL
ht…
gperu updated
5 months ago
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Please complete the following information about the language:
- Name: Nextflow
- Website: https://www.nextflow.io
- Language Version: DSL2
The following are optional, but will help us add the …
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Currently, we dont recommend but write in the README also about manual conda/mamba installation of the dependnecies. Two things:
* 1) I think the conda commands can be merged into one such as (why …
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Every now and again, the CI throws this issue:
[info] - Test for concurrency issues *** FAILED ***
[info] 1 did not equal 0
[info] exit code was 1
[info] Std output:
…
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### Ask away!
Hello,
I'm trying to run some older data through the wf-artic pipeline. I used Guppy to basecall this data with model
dna_r9.4.1_450bps_sup.cfg.
:
Fi…
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Nextflow command:
```
nextflow run nf-core/sarek -profile docker --input samplesheet.csv --outdir sarek-chop-output
```