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Hi,
I am comparing circular sequences with random start points. It there a way that I can manually change the start points of the seq tracks without changing the mapping of the other tracks to the s…
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```
What steps will reproduce the problem?
1.-bash-4.1$ ngs.plot.r -G hg19 -R genebody -C
/srv/gsfs0/projects/cho/riboseq/bam/R10_Rluc_control_arsenite_R1.hg19.bam -O
R10.genebody
.
What is the exp…
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## Expected Behavior
I am using the easy cluster pipeline to cluster sequences with min-seq-id = 0.5. So, the centroids of the clusters should be less than 50% identical.
## Current Behavior
How…
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Hello,
First of all, thank you for sharing such a great material, it really helps me to understand the general structure in the analysis.
While I was trying to follow the steps I encountered wit…
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Hi. I'm sharing a little function that approximately preserves class balance within each training and validation set, even when ids are non-unique, as long as the minority class is rare (adapted from …
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Dear Colleagues,
for "Due" and "IT" in the IterationControl only the first value from the theta vector is compared with the value from the previous iteration. Therefore, the following warning is gene…
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Although the function is quite small, you still need to bear in mind that implementing into different modules is far more better if there is something can be divided.
e.g. [your source code](ht…
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Here's a stab at getting a "neighbourhood" of values from the bins.
```R
## extract bin values with distance radius and within a negative time window (in days)
bin_extract
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This is an example with real data. x-y coordinates have been scaled to mean 0, sd 1. There are 167 distinct locations and 1365 total observations, which are counts ranging from 0 to 7. Gzipped data fi…
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GV(x=c(rep(100, 10), rep(120, 10), 105, 85), times=seq(0, 1260, 60), unit='mg', m_index=120, k=60, s=1, conga_n=1, interval=1, thresh=100, event_thresh=55)
Measure Manuscript …