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thackl
/
gggenomes
A grammar of graphics for comparative genomics
https://thackl.github.io/gggenomes/
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geom_link() is not working properly
#195
tahsinkhann
opened
1 day ago
0
Two tibble gff3 files appear empty when loading in.
#194
tania-k
opened
4 days ago
3
Drop ellipsis dependency + avoid tidyselect deprecated syntax
#193
olivroy
opened
4 days ago
2
Combination plots with ggtree possible?
#192
bananabenana
closed
5 days ago
1
markdown expressions in geom_gene_text
#191
thackl
closed
4 days ago
1
Changing start site of seq track and keeping layout.
#190
Rikkiff
opened
2 weeks ago
4
Perl to r
#189
iimog
closed
1 week ago
0
Generate blast links with NCBI blast, easy to use row.names()
#188
yzhong005
opened
3 weeks ago
1
Error when loading emales.fna with https://github.com/thackl/gggenomes/blob/HEAD/vignettes/emales.Rmd
#187
tr31zh
opened
1 month ago
1
Calculate coordinates from gff file with genes in different directions
#186
cabraham03
opened
1 month ago
1
How can I change the distance (spacer) between different seqs?
#185
shaodongyan
closed
1 month ago
2
Multiple coverage tracks supported?
#184
AlexSCFraser
closed
1 month ago
4
read_feats error
#183
cms72
opened
2 months ago
4
Incorrect labels for scale with large sequences
#182
YannDussert
opened
2 months ago
1
unexpected error on example data
#181
Jigyasa3
closed
1 month ago
1
Error in guides$setup(scales, aesthetics, default = params$guide_default %||% : attempt to apply non-function
#180
nlotun
closed
3 months ago
1
Error in eval(`_inherit`, env, NULL): object 'Guides' not found.
#179
xiahui625649
closed
1 month ago
1
Add ggplot 3.5.0 compatibility (guides and layout ggproto)
#178
thackl
closed
4 months ago
0
Gff not recognized
#177
m-bogaerts
closed
4 months ago
6
ggsave throws error in example code
#176
bkille
closed
4 months ago
8
Show y-axis for geom_wiggle() and offset geom_feat()
#175
22paulae
opened
5 months ago
1
Different genome scales 2
#174
waltercostamb
opened
5 months ago
0
Operon boxes
#173
waltercostamb
closed
6 months ago
2
Unused parameter in drop_feat_layout
#172
iimog
closed
4 months ago
2
read_seqs() function not working for me
#171
Rikkiff
closed
3 days ago
9
Error in Installation
#170
eylulkepcen
closed
8 months ago
4
how to remove link borders?
#169
algrgr
closed
6 months ago
2
Make gggenomes ready for CRAN submission
#168
iimog
closed
4 months ago
19
switch from size to linewidth for line geoms
#167
thackl
opened
8 months ago
0
Remove thacklr dependency
#166
thackl
closed
8 months ago
0
Fix logo
#165
thackl
opened
8 months ago
0
switch to R 4.1.2 and R pipe
#164
thackl
opened
8 months ago
1
shift example broken
#163
thackl
closed
8 months ago
0
added geom_seq_break()
#162
thackl
closed
8 months ago
0
Introducing sequence breaks?
#161
trnpl
closed
8 months ago
8
fix #138 geom_blank error
#160
thackl
closed
9 months ago
0
Error using continuous fill of geom_link() at same time as discrete fill of geom_gene()
#159
lukesarre
closed
9 months ago
2
Draw a combined plot with ggtree and gggenomes
#158
WRran-Hydrogen
closed
9 months ago
3
Fix empty attributes check in read_gff3
#157
iimog
closed
9 months ago
0
Error in read_feats
#156
mgabriell1
closed
10 months ago
4
breaks to sequences with geom_break()
#155
jwinternitz
closed
8 months ago
1
Improved documentation
#154
BvAdrichem
closed
1 year ago
0
! Required column(s) missing: • length
#153
jeffreyblanchard
closed
1 year ago
2
Changing gene colours
#152
samrthakur
closed
1 year ago
2
Add GC content function for plot.
#151
yzhong005
opened
1 year ago
0
Change space between seqs within the same bin
#150
yzhong005
closed
9 months ago
5
Errors when running read_feats command
#149
fusho96
closed
1 year ago
3
geom_gene() doesn't work
#148
kir1to455
closed
1 year ago
5
shitf() "unused argument"
#147
gjordaopiedade
closed
1 year ago
2
Setting coordinates to visualise part of the genome
#146
samrthakur
closed
1 year ago
1
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