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thackl
/
gggenomes
A grammar of graphics for comparative genomics
https://thackl.github.io/gggenomes/
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Genes do not start and end at the expected positions
#145
pendy05
closed
1 year ago
2
Vcf functions
#144
BvAdrichem
closed
1 year ago
0
Adding UTRs in the plot
#143
ChongLC
closed
1 year ago
3
Move deps from Depends to Imports?
#142
lionel-
closed
9 months ago
2
fill and fontface otions for geom_gene_label
#141
minalj365
closed
1 year ago
4
Installation error
#140
Angel-Popa
closed
1 year ago
3
Geom coverage and geom_feat.rd update
#139
BvAdrichem
closed
1 year ago
0
ggplot2 error using example data
#138
jzluo
closed
9 months ago
6
Added linewidth in geom_feat
#137
BvAdrichem
closed
1 year ago
0
Errror while installing
#136
ChongLC
closed
1 year ago
1
Submission for JOSS?
#135
majensen
opened
1 year ago
0
Strand error when call gggenome()
#134
zmz1988
closed
1 year ago
0
geom_link new error
#133
MaximePolicarpo
closed
1 year ago
2
geom_feat size and position not responding
#132
TomasaSbaffi
closed
1 year ago
3
Error in `geom_link()`:
#131
fhu2008
closed
1 year ago
7
Overlapping text lables
#130
minalj365
closed
1 year ago
2
Draw links as single lines?
#129
TC-Hewitt
closed
9 months ago
4
Focus on different region of different genomes
#128
LemoAlex
closed
9 months ago
4
position seq tracks?
#127
TC-Hewitt
closed
1 year ago
1
working example
#126
madhubioinfo
closed
1 year ago
1
changing shape of gene features？
#125
Tonny-zhou
closed
1 year ago
3
`flip()` does not flip the links
#124
makrez
closed
2 years ago
3
Changing color of links
#123
Marlon751
closed
1 year ago
2
A question regarding synteny
#122
Rahimlou
closed
1 year ago
1
";" in gbk fields break read_gbk/gb2gff
#121
thackl
closed
2 years ago
1
.paf 0-based coords not transformed in read_paf
#120
thackl
closed
2 years ago
0
Different genomes scales
#119
tgodoy
closed
1 year ago
5
gbff files cannot be imported
#118
Rahimlou
opened
2 years ago
5
seq-len breaks in windows newlines
#117
thackl
closed
2 years ago
0
Scale on ribbon
#116
Daniel-Ze
opened
2 years ago
4
Transform gggenomes to R plotly?
#115
cms72
closed
2 years ago
2
Mapping metadata to label
#114
hkaspersen
closed
2 years ago
4
Sublinks between CDS with the same ID
#113
tardl
closed
2 years ago
1
flip_by_links() is not working
#112
xvtyzn
closed
9 months ago
1
Zoom sequence
#111
hkaspersen
closed
2 years ago
2
Typo fix
#110
BioGeek
closed
2 years ago
1
Is there a new reproducible example?
#109
kieft1bp
opened
2 years ago
3
typos
#108
raynamharris
closed
1 year ago
0
read_paf 'Error in if (nrow(tag_mx_nr) == 0) { : argument is of length zero'
#107
sodosopah
opened
2 years ago
0
conflicts between gggenomes and gggenes
#106
zhaoxvwahaha
closed
9 months ago
1
install error
#105
zhaoxvwahaha
closed
2 years ago
3
Bézier curve for synteny block
#104
baozg
opened
2 years ago
2
focus on links only partially working
#103
thackl
closed
2 years ago
0
focus with manual loci breaks if locus_id not provided
#102
thackl
closed
2 years ago
0
plot multiple segments of a sequence in a single bin
#101
cgjosephlee
closed
2 years ago
10
Fill by gene rather than CDS
#100
andreaniml
closed
2 years ago
2
Geom_ribbon simple example
#99
olekto
closed
2 years ago
3
Too many col_names
#98
olekto
closed
2 years ago
3
logo change in readme
#97
frknc
closed
2 years ago
0
read_feats() fails on reading gff files - need to @import dplyr
#96
bfrommer
closed
2 years ago
7
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