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Some of the statistical concepts are missing, including mean, median, range, standard deviation, percentage. Also, there can be some concepts how people describe statistical data in from the trials (f…
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mysql --host=ensembldb.ensembl.org --port=3306 --user=anonymous -p
no password
https://www.ensembl.org/info/data/mysql.html
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Hi,
I am getting the following error when I test the Cancer tumor normal example. I think there are two main errors
1> "Aligning lane 1_2014-08-13_dream-syn3 with bwa aligner cat: write error: Br…
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The Quaternary Symmetry detection algorithm gives False Positive helical symmetry results in some of the PDB entries. Two structures have been found so far: 3OQ9 ad 3MOP.
![image](https://cloud.githu…
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Hi guys, I'm working with your snapshot. I managed to skip the tests with adding an extra exclude to your pom.xml (excluding **) but some of the ones in biojava-structure were failing. So skipping t…
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Hi,
I am trying to install a genome with a gene annotation so that I can run snpEff together with variant calling.
The installation of the reference genome crashes when trying to do something with…
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Might be ok, some ribosomal proteins are assembly, but they aren't usually also translation
rpl701
endonucleolytic cleavage involved in tRNA processing
endonucleolytic cleavage in ITS1 to s…
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```
Documenting email thread here:
From Chris Mungall:
Hi Marcus
We're trying to make use of ECO in our infrastructure. We assume there is a 1:1
mapping between an ECO class and a GAF code, and that …
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Hello,
I am performing CNV analysis on DNA data. Here is my configuration file:
``` details:
- analysis: variant2
genome_build: hg19
algorithm:
mark_duplicates: true
recalibrate…
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Hi @DCGenomics,
Do you have a list of project titles and maybe the description of them from previous hackathons you were involved in? We would like to see what a successful project look like and prov…