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Hello,
I'm trying to run PGAP on an HPC cluster using singularity + slurm and I'm running into some troubles.
While pgap is installing/running fine with our "test genome" on the main machine t…
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### Steps to reproduce the issue
```console
$ spack spec paraview@5.9.0
Input spec
--------------------------------
paraview@5.9.0
Concretized
--------------------------------
paravi…
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## Expected Behavior
splitting of MSAs works multi-threaded
might be related to #189
## Current Behavior
on larger final.a3m files unpackdb stalls and does not continue when executed via colabf…
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When I ran this command,
`python setup.py install --install-platlib=./src/`
I got this error,
```
/beegfs/home/syl/anaconda3/envs/virhost/lib/python3.11/site-packages/setuptools/command/install.py…
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Using `reactable` with `plotly::highlight` and `crosstalk::SharedData` as input works like a charm:
```{r}
library(reactable)
library(plotly)
library(crosstalk)
shared %
plot_ly(x = ~Se…
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I have a filesystem with a relatively large number of files (100 million). Even without any changed files it still takes almost a day to traverse the filesystem. Is there any way to parallelise the fi…
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Ganglia currently has no maintainers: https://sourceforge.net/p/ganglia/mailman/message/36795542/
For the centOS8.1 version you might want to think about replacing Ganglia.
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Hi, I would like to analyze my shallow shotgun metagenomics data according to the OGU method, https://journals.asm.org/doi/10.1128/msystems.00167-22
The recommended aligner is Shogun, especially I as…
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Cause I want to know the crispr/cas in genomes(refseq of bac and arc in NCBI), so I run this command,
`perl CRISPRCasFinder.pl -in ~/database_db/refseq/archaea_library.fna -so sel392v2.so -cas -keep …