-
When this issue was opened, 151 active ontologies in the OBO Foundry did not have a `publications:` entry in their metadata. This field is used to generate the citation information on the ontology pag…
-
Hi,
i am using RStudio from a conda created environment. I installed rlang and featuretable using the introction in the gitpage.
the featuretable library was installed and loaded succesfully. I coul…
-
Hi, I'm running mag and have run into a problem where it throws an error and stops running when quast reaches a contig file that has no contigs meeting the minimum length requirement. Is it possible t…
-
Dear Francisco,
I'm a PhD student from University of Groningen, focusing on host-gut microbiome interaction in HIV infection.
Recently, I am trying to use MetaGEM to answer my study hypothesis 🐬.…
-
Sometimes we just want to look for potential pathogens for side-projects where there is no specific interest in the microbiome or when demographics is more the focus than microbes. In this cases it wo…
-
Hello, I am using keggcharter with the "output" that I got from reCOgnizer, but I constantly get errors, could you help me build my command line, please?
This is the command line I am using:
keggc…
-
### Description of the bug
Getting the following error:
```
Command error:
Error: invalid configuration, cannot specify resource limits without cgroups v2 and --cgroup-manager=systemd
```
…
-
Hi!
After installing sunbeam, I am running the run-tests script, but it results the following error:
I use this command to run the script:
`bash tests/run_tests.bash -e sunbeam3.1.1`
The error I…
-
Welcome Outreachy Applicants!
_Note: This task can be completed by multiple Outreachy applicants._
### BugSigDB Project
BugSigDB is a wiki built to capture standardized microbial signatures…
-
**Submitting author:** @ym2877 (Yoli Meydan)
**Repository:** https://github.com/korem-lab/pymgpipe
**Branch with paper.md** (empty if default branch): joss-paper
**Version:** v0.16.10
**Editor:** @fbo…