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@kescobo ran into some out-of-memory errors when trying to do `sourmash compare` on 100k genomes, and we became curious about memory usage 😆
kevin:
>One thing you could do is, if you know ~how mu…
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Since Zig is a pretty lightweight language and the compiler will support a diverse range of backends, I think it's time that we considered offering the compiler as a separate library that doesn't have…
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I have reported this issue a months ago. and during the time I haven't use it at all cuz the first time I reported it. it still haven't fixed for weeks so I just quit and think that I'll come back lat…
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Hi,
I'm using the **foj_demo.ipynb** code to run FOJ on my images but I run out of memory with the default parameters even though running with 40G of GPU memory.
For example a 128x128 image take…
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Hi,
I wrote a post on building a data compression utility in Haskell using Huffman codes and I think it might be a good addition to the weekly newsletter.
It explores Huffman codes, data seriali…
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I stumbled over https://github.com/dbaranchuk/ivf-hnsw
Did anyone tried to benchmark their implementation?
Is there conzeptual difference between ivf-hnsw and hnsw from hnswlib or nswlib?
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Please report on the following
Memory Usage:
Storage Usage:
Compute Usage:
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### 🚀 Motivation and context
As we analyze larger and more traces at scale the **time for parsing trace files** gets into the critical path.
In this work-stream, we plan to identify and fix performa…
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This is meant to address #3802, and supersedes #4748. More background info can be found on those two issues.
There is currently no high-performance code path for getting `ImageData` from a `MediaSt…
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Hi,
I have an ome.tiff image from Xenium instrument and I am using cellpose to do segmentation. However, the file is too heavy and I can not do so even under server access.
I would be thankful to kn…