-
Title: Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells
# General Information
## Please paste a link to the paper or a citation here:
Link: http…
-
### Context
Following the naming pattern set in SARS-CoV-2 sequences, strain names are usually `//`. All three fields are typically available in the metadata so we can concatenate them to "build" a r…
-
Aus: https://luftfilterbegehren.at/faq/
> Wir möchten die Sicherheit unserer Mitmenschen vor SARS-COV-2 und anderen durch die Luft übertragenen Viren erhöhen.
Evt. Viren durch Krankheiten ersetzen?
…
-
Here are the first round reviews from the Diagnostics manuscript as an itemized list and the full text:
- [ ] Reviewer 1.1 --> #1173
- [ ] Reviewer 1.2 (this is a long one, we could split it up)
…
-
I'm having problems with Longshot when running the [Artic pipeline](https://github.com/artic-network/fieldbioinformatics) (even after updating Longshot to v0.4.3, since Artic still uses v0.4.1), in th…
-
@asl @rcedgar
To help coronaSPAdes identify CoV-associated contigs from the full assembly graph, we need to expand our set of target HMMs.
Versions:
1. Pfam-SARS model HMMs
2. (current) All H…
-
I am trying to find out deletions in the amino acid coordinates from nucleotide position of SARS cov-2 spike gene.
For eg. how to find out amino acid position of S:del:21764:7
--
-
I trained nanoGPT for 200,000 epochs on a ~5gb dataset of COVID-19 research papers (from here):
https://allenai.org/data/cord-19
I am running 'MPS' on an Intel 2021 iMac 27" with an AMD Radeon P…
-
Hi,
Do you provide any resource for the list of mutational changes per clade?
In the dataset that is acquired with Nextclade CLI, `nextstrain/sars-cov-2/wuhan-hu-1`, there is this statement in R…
-
Hi Metabuli team,
First of all, I would like to thank you for such an excellent tool, I really enjoy using it. I’m currently using Metabuli to classify my viral metagenome sequences, and I have bee…