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Hi, I am trying to reproduce the results on kits dataset. I downloaded the kits dataset, preprocessed it using preprocessing_kits.py file from .nii.gz to .h5 format. While testing i found that the mod…
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I am new to medical imaging and pyradiomics too. I am working on my project where we have dicom files of patients and we want to calculate radiomics features for the dicom files.
I want to use pyr…
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@LeeTL1220 has already made substantial progress on this front, but I think we can improve ground truth sets and expand the number and type of evaluation metrics calculated. To start, this will inclu…
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* Name of dataset: StructSeg
* URL of dataset: https://structseg2019.grand-challenge.org/Home/
* License of dataset: Unknown
* Short description of dataset and use case(s):
The dataset contains t…
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### Description
When an image (with the same physical resolution as the reference image) is cropped with the command-line `sct_crop_image -ref`, the resulting cropped image doesn't have the same dime…
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**Describe the issue**
When running PureCN with my segmentation and VCF files, I encounter an error that says "Segmentation and VCF do not overlap." This stops the execution of the program.
**To R…
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I see you constantly staring or trying everything in machine learning.
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Hi Havard. I have some MRI images from liver. All of them contain tumors. I wanted to predict the survival functions from these images. for images there was one example with mnist dataset. I wanted to…
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**Describe the bug**
I am trying to reproduce the Swin UNETR. I am doing finetuning, using the code and model.pt file given at:
https://github.com/Project-MONAI/research-contributions/tree/main/Sw…
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Hello, I'm a graduate student. I'm studying medical segmentation recently. I want to run your project. However, my application for the BraTS 2020 dataset on the official website has not been approved …