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[Test link](http://localhost:3000/#cohort=TCGA%20Lung%20Adenocarcinoma%20(LUAD)&wizard=analysis&subCohortSamples1=TCGA%20Lung%20Adenocarcinoma%20(LUAD):Solid%20Tissue%20Normal:TCGA-38-4626-11,TCGA-4…
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Hello,
I'm following this tutorial "TCGA Pan-cancer data download" (https://xsliulab.github.io/tumor-immunogenicity-score/#data-download-and-preprocessing) to download and clean TCGA clinical data.…
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Status as of 11/5/19: UCSC Xena integration added
Status as of 10/7/19: scope is now Terra and SCEA; SCP has been removed.
We want to avoid users downloading data from the DCP by enabling them to acc…
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#12
通过 wget curl 系统命令实现
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```
> XenaGenerate(subset = XenaHostNames=="gdcHub") %>%
+ XenaFilter(filterDatasets = "methylation|phenotype") %>%
+ XenaFilter(filterDatasets = "UCS") -> df_todo
> XenaQuery(df_todo) %>%
…
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Get devs working with users for rapid feedback.
┆Issue Number: HCAB-389
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Submitting Author: ShixiangWang (@ShixiangWang)
Repository: https://github.com/ShixiangWang/UCSCXenaTools
Version submitted: 1.2.3
Editor: @melvidoni
Reviewer 1: @ChristineStawitz-NOAA
Re…
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┆Issue is synchronized with this [Jira Story](https://ucsc-cgl.atlassian.net/browse/ANVIL-13)
┆Issue Type: Story
┆Project Name: AnVIL
┆Issue Number: ANVIL-13
┆Epic: Define Apps
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The project can be released to pypi so that it can be easily downloaded by pip or other installers.
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Submitting Author: Shixiang Wang (@ShixiangWang)
Repository: https://github.com/ShixiangWang/UCSCXenaTools
---
- Paste the full DESCRIPTION file inside a code block below:
```
Package…