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How do I re-use the gid in `ParallelContext::source_var(),` which in my understanding, does not allow it?
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https://mp.weixin.qq.com/s/YZlwlcVgFkiwifbmnmgC6g
ixxmu updated
2 years ago
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Running the fix hgnc script errors out.
```
> fix.bad.hgnc.symbols(ctd_darmanis, dropNonHGNC = F)
[1] "2841 of 22088 are not proper HGNC symbols"
[1] "Possible corruption of gene names by excel: S…
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Thanks for the very helpful package.
I am confused at the part of the pseudotime analysis in the tutorial of DG.
What do the root cells and end cells mean exactly? And how to to deal with branch…
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Hi @nturaga @friedue @LTLA @j-andrews7 @zhihua-chen
I have been working on a 5 umaps which takes annotations from the 5 databases and annotate single cells. My aim is to annotate a cell type with …
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Hi,
I am using RCTD on a small data with about 500 genes and 1000 spots/locations. When I run:
myRCTD
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Would be nice if the string matching in the NodeSet functionality (and by extension, I guess, attribute matching) could perform a glob match to not have to specify dozens of values.
(spin off from …
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Hello it's me again 😄
So I've tried to continue my grouped and integrated analysis using only 2 samples and during both steps **Int_Clust_Markers_Annot_GE** and **Grp_Clust_Markers_Annot_GE** afte…
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In some project, samples are from different batch(sequencing centre, different date, etc.) and might have different strand protocol. We currently implicitly detected the strandness of the sample by c…
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