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OBO Core is an opportunity to build bridges to other ontologies, particularly those connected to the W3C:
- OWL Time
- PROV: Provenance
- The Organization Ontology
- QUDT: Quantities, Units, Dim…
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Hi everyone,
I have some exciting news -- @cgreene spoke with the Editor in Chief at _mSystems_, and they are willing to review our manuscript, and then (if it is accepted) they will periodically rev…
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I chose CellChat to study potential cell-to-cell interaction and I'd like to thank you for developing these amazing tools.
I've generated scRNA-seq datasets (20 patients with 5 groups where each gr…
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This issue address Proposal 1 of Bjoern Peters @bpeters42 from https://docs.google.com/document/d/1bSpiZc5p9VNCZ83I4VUEwOVGoFTZ3cpXZKOSRAaGBZc/edit?usp=sharing
proposed hierarchy based on existing …
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I can see that the error relating to namespace prefixes not being defined has been raised before. However I wasn't too sure from the answers what the solution was. I gathered that you can add back the…
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Hello! An error occurred when I ran the example:
Merging objects
Finding neighborhoods for endothelial cells ...
Error in nn2(data = numeric(0), query = numeric(0), k = 31, eps = 0) :
Cannot …
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cc @turbomam
If we need to represent Illumina NovaSeq 6000 S4, I assume we would create a subclass of
id: OBI:0400043
name: flow cell
def: "Aparatus in the fluidic subsystem where the sheath…
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Hi,
we found it several times that when we have both SNP6.0 data and WES data for the same sample, there is inconsistent CN results in high coverage (peak) regions. CopywriteR was not able to reflect…
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Does OBI want to take on lists of sequencing assembly software? If so, I can create NTRS for Unicycler, Shovil, Velvet, Canu, Spades. Its possible a "software template" could be fashioned for these.
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Hi,
I compared 5 multiple datasets simultaneously following each Cellchat dataset generated. I used "netVisual_heatmap" to analyze the overall signaling patterns of 5 groups side by side as below. …