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As discussed at the JME forum: https://hub.jmonkeyengine.org/t/rounded-object-falls-through-terrain/47584
Changes to the test app that prevent fallthrough:
1. disabling contact filtering on the t…
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Hello,
I'm finding the need to update metadata column types in some of my analyses. For example, changing one variable that is interpreted as 'numeric' to 'categorical'.
Specifically, I am test…
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**Improvement Description**
This change would involve using a different Cytoscape.js layout method for the provenance graph—in particular, one that is aware of the graph's DAG structure.
This is a…
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An important question about random generator support remains in scikit-bio. I am pinging @wasade because this question also impacts biom-format, and I would like also to seek @mortonjt and @mataton 's…
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First of all thanks to the creator and all the contributors of this amazing module.
Today I encountered this issue. I was following the [example sklearn notebook](http://nbviewer.jupyter.org/github/…
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Dear Davit,
Thank you for your very useful and cute package, Microviz. With my student we are having problems building PCoA plot with ord_plot function. We get the following error message:
Error…
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When running normalize_table.py the "taxonomy" observation metadata is not properly encoded in the output file.
1) When using the `-a DESeq2` the taxonomy data is not included at all in the output f…
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The ordination functions (`nms_ord` and `pcoa_ord`) have an increasing number of arguments that are just handed down to the `graphics::plot` call in the heart of both functions. This is cumbersome and…
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iEat requires the evaluation of similarity between species. While similarity measurement methods can and will be implemented directly in the function, it may be a good idea to allow users to include a…
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Hello,
first of all thank you so much for creating this package!
I wondered if I could use the rlq() function when the Q matrix(dudiQ) is computed dudi.pco as follow:
```{R}
library(ade4)
data(…