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I have uploaded an abstract draft for submission to the Australasian Plant Pathology Society (APPS) conference. The deadline is tomorrow (25/7/19) at midnight.
Does anyone have any comments or edits?…
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Hi @sporangia and @kaitlinmgold ,
Just touching base on our conversation for a R intro for APS2020. I see info at [the APS site](https://www.apsnet.org/meetings/annual/planthealth2020/program/Page…
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Some APS URLs contain an "open access" note, but I don't see any link to PDF anywhere. The oaDOI API correctly says it's not open access, but maybe there is actually an accessible URL somewhere?
http…
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We have a Mailchimp account already setup and manually loaded with a list of all of our users.
Other than the nice UI they have to build emails, Mailchimp provides an SDK to manage how users enlist…
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We would like to establish a phenotype extension option for
"disease_causing_ability"
This will be an option on all pathogen host interactions initially. Gradually @CuzickA will refine when the…
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I just installed this program and am trying to run the sample file through, but keep running into issues with the 'training augustus' step.
```
(fgmp) MBP-19-C02YPJ7PLVCF:FGMP NAME$ src/fgmp.pl -g …
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https://docs.google.com/spreadsheets/d/1UHS9rbGuQZOydJ7XVkUPSlFkFb2ZAvkzX5mq-MxrE2A/edit#gid=1024757382
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Issue #1: Filtering_vcf.R
The masks created to filter the variants based on depth look like this:
# Step 1
# Filtering by DP (DP ranges (5% < x > 95%))
cat("Step 1: Filtering by DP quantiles\n")
…
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Hi Jon,
I'm trying to follow the steps you outline in https://github.com/nextgenusfs/gene2product/issues/2.
The need-curating.txt file after my annotation run has output like this (mostly eggNOG…
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243189
RCAM [Rutgers university Herbarium]
http://sweetgum.nybg.org/science/ih/herbarium_details.php?irn=125837
Luc