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**Is your feature request related to a problem? Please describe.**
Tags template metadata are currently somewhat loose, undefined keywords.
**Describe the solution you'd like**
To take full adva…
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Hi all @jpfeuffer @timosachsenberg @enriquea @dai:
We have recently generated data for almost 100 datasets, differentially expression analyses (DE), and absolute/baseline expression analyses (AE). …
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https://github.com/fgcz/rawrr/blob/b14db4f59b9ba2f641a1579ead489a0bc96c26c7/R/rawrr.R#L1286
the unit seconds is wrong. it should be minutes.
@tobiasko can you confirm?
C
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Hi!
I'm doing a smalle trial for my experiment where I'm currently running 5000 SILAC DDA raw files through the different modules of fragpipe. MSfragger took about 48hrs to finish for all files (r…
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Unless I am doing something wrong, it seems that the package's database has not been updated in several years?
```
> devtools::install_github("rformassspectrometry/unimod", upgrade = TRUE, force =…
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In `measureAbundance`, the location of the protemics data is hard-coded. This is inconvenient if one would for instance have proteomics data for many conditions and want to make models for each of the…
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- Describe the issue or question:
Hello,
I am running a "Non_Specific_HLA" search on Fragpipe v 19.1 for several immunopeptidomic datasets. I have set "run.msfragger=true" in the workflow. The wor…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/RforMassSpectrometry/MsDataHub
Confirm the follow…
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What are the key criteria for evaluating vector databases?
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Hi,
I'm getting an error that I'm having trouble debugging when running OmicsEV in the container given. At the very bottom, it says it's trying to connect to a host on port 22 and times out. Is the…