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bigbio
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quantms.io
The proteomics quantification format, extending mzTab for large scale datasets.
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Major changes in the specification
#46
ypriverol
closed
3 weeks ago
0
[Discussion] Sharding parquet files
#45
jspaezp
opened
1 month ago
3
Multiple bugs fixed
#44
ypriverol
closed
2 months ago
0
Technical replicate included
#43
ypriverol
closed
2 months ago
0
Major refactoring of the structure of the package.
#42
ypriverol
closed
2 months ago
0
LFQ experiment lost technical repetitions in feature.parquet
#41
WangHong007
closed
1 month ago
1
black
#40
ypriverol
closed
2 months ago
0
minor changes
#39
ypriverol
closed
2 months ago
0
Major PR including tests, docs and performance improvements.
#38
ypriverol
closed
2 months ago
0
Integrity check needed.
#37
ypriverol
opened
4 months ago
0
Provide an example for a TMT, LFQ and DIA with the current representation
#36
ypriverol
opened
5 months ago
0
Additional columns/examples questions
#35
timosachsenberg
opened
5 months ago
2
Review of the format by additional contributors.
#34
ypriverol
opened
5 months ago
0
Implement a Json representation for quantms.io including tests
#33
ypriverol
opened
5 months ago
0
Test the quantms.io with the largest submission reanalyzed PXD039236
#32
ypriverol
opened
5 months ago
0
Integrate quantms.io into quantms
#31
ypriverol
opened
5 months ago
0
Update the quantms.io documentation.
#30
ypriverol
opened
5 months ago
0
Add the first bioconda configuration and release.
#29
ypriverol
opened
5 months ago
0
Add multiple tests to the library.
#28
ypriverol
opened
5 months ago
0
quantms.io file format version 1.0
#27
ypriverol
opened
5 months ago
0
Error reading IBAQ file
#26
ypriverol
opened
6 months ago
0
major changes
#25
ypriverol
closed
6 months ago
0
Major changes.
#24
ypriverol
closed
6 months ago
0
Absolute expression from ibaqpy to ae file format.
#23
ypriverol
closed
6 months ago
0
annotate shell code as shell - not python
#22
fabianegli
closed
7 months ago
0
I was working with one project with two factor value
#21
ypriverol
opened
7 months ago
1
Dev
#20
ypriverol
closed
7 months ago
0
Itraq_support
#19
ypriverol
closed
8 months ago
0
Dev
#18
ypriverol
closed
8 months ago
0
Dev
#17
ypriverol
closed
8 months ago
0
Dev
#16
ypriverol
closed
9 months ago
0
Dev
#15
ypriverol
closed
9 months ago
0
Dev
#14
ypriverol
closed
9 months ago
0
minor changes
#13
ypriverol
closed
9 months ago
0
Dev
#12
ypriverol
closed
9 months ago
0
Dev
#11
ypriverol
closed
9 months ago
0
Added multiple features and examples.
#10
ypriverol
closed
9 months ago
0
Logging should be replacing print
#9
ypriverol
opened
9 months ago
0
command to compare two parquet
#8
ypriverol
closed
9 months ago
1
Syncronize the documentation of PSM, Feature with the current code
#7
ypriverol
closed
9 months ago
0
Create a command that allows to inject spectra into psm or feature tables.
#6
ypriverol
closed
8 months ago
0
Structure of a quantms parquet project
#5
ypriverol
closed
8 months ago
0
Embedding metadata in Parquet files?
#4
wfondrie
opened
10 months ago
1
Add protein, peptide, psm io format
#3
daichengxin
closed
10 months ago
29
METADATA FORMAT
#2
ypriverol
closed
11 months ago
11
Output format for AI, web and other use cases --- Discussion
#1
ypriverol
closed
10 months ago
14