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BioNano can be very good at showing structural variation but it has not yet been prioritized as a format for looking at. There was the bionano jbrowse plugin here https://github.com/bionanogenomics/JB…
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It catches up eventually but if (for example) I spin the mouse wheel fast to get the the edges of the alignment, I often see blank screen for a few seconds. Is there a reason why it has to blank the s…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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Some of our core plugins that were developed before the external plugin architecture was fully developed might fit better as external plugins. The purpose of moving them would be to keep the core plug…
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Hello JBrowse2 development team,
I have encountered an issue with JBrowse2: it currently seems to be unable to support downloading files in GenBank format. In particular, I am in need of the join f…
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Hi,
is there a way to modify the HTTP request headers that JBrowseR sends? I have got a flask server providing the data via stream and an R app set up. Now I would like to modify the request header…
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This was not a commonly extended feature in JB1 but it can enable some special use-cases
Could be done for both canvas (which is currently just pileup, but it being just pileup may need revisiting)…
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Using the branch [add_check_initial](https://github.com/GMOD/Apollo3/tree/add_check_initial), render the contents of the checkResults (stored in the client data store) in the LinearApolloDisplay. As a…
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In the branch [add_check_initial](https://github.com/GMOD/Apollo3/tree/add_check_initial):
- Make a new directory in `packages/apollo-shared/src` called "Checks"
- Make an abstract base class "Check…
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https://genome.ucsc.edu/goldenPath/help/api.html