GMOD jbrowse-components issues

GMOD / jbrowse-components

Source code for JBrowse 2, a modern React-based genome browser

https://jbrowse.org/jb2

Apache License 2.0

209 stars 62 forks source link

issues

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Add fix for potential hydration mismatch errors

#4675 cmdcolin opened 9 minutes ago
0
'Hydration mismatch' errors after stop token implementation

#4674 cmdcolin opened 2 hours ago
2
Shade the "intron" skips in RNA-seq reads according to XS/TS/ts tag

#4673 cmdcolin opened 2 days ago
1
Add BedGraphAdapter and BedGraphTabixAdapter

#4672 cmdcolin closed 2 days ago
2
Poorly spaced layout with show soft clipping in some cases

#4671 cmdcolin opened 3 days ago
1
Fix GC-content track regression in v2.17.0

#4670 cmdcolin closed 3 days ago
0
Local dev mode in chrome on linux can freeze with "blank" tracks sometimes

#4669 cmdcolin opened 3 days ago
1
GCContent track empty in v2.17.0

#4668 cmdcolin closed 3 days ago
0
Reduce self-pairing for some paired-end read data in breakpoint split view

#4667 cmdcolin closed 3 days ago
0
Fix oclif test suite or migrate away from oclif

#4666 cmdcolin opened 3 days ago
0
Add "copy consensus sequence" command to alignments tracks

#4665 cmdcolin opened 3 days ago
0
Replace AbortSignal with "stop token" to rescue some aborting behavior

#4663 cmdcolin closed 3 days ago
2
Add better handling for bedMethyl files

#4662 cmdcolin closed 4 days ago
1
Bump @eslint/plugin-kit from 0.2.2 to 0.2.3

#4661 dependabot[bot] closed 3 days ago
1
Add "Link supplementary reads" type functionality

#4659 cmdcolin opened 1 week ago
1
Add ability to add a new row onto a existing breakpoint split view

#4658 cmdcolin opened 1 week ago
0
Use a smarter search box for track searching

#4655 cmdcolin opened 1 week ago
1
Reduce re-rendering on quantitative and snpcoverage track height adjustments (pt. 2)

#4654 cmdcolin closed 1 week ago
5
v2.17.0 release announcement

#4653 cmdcolin closed 1 week ago
0
Reduce re-rendering on quantitative and snpcoverage track height adjustments

#4652 cmdcolin closed 1 week ago
0
Add mismatches cache to improve performance on ultra-long reads

#4651 cmdcolin closed 1 week ago
3
Add support for displaying SNPs in "no_ref" CRAM files

#4649 cmdcolin closed 1 week ago
0
Run codemod fix for some MUI deprecated props

#4648 cmdcolin closed 1 week ago
0
Improved rendering of modifications

#4647 cmdcolin closed 1 week ago
1
Fix mouseover pixelation on linear synteny view

#4646 cmdcolin closed 2 weeks ago
0
Delay cascading menu closing after mouseout

#4645 cmdcolin closed 2 weeks ago
0
Add support for viewing no_ref CRAM files

#4644 cmdcolin closed 1 week ago
1
Add ability to get info about the currently mouseover'd position on reads

#4643 cmdcolin opened 2 weeks ago
0
Hide low probability modifications from SNP coverage display

#4642 cmdcolin closed 2 weeks ago
1
Using "Custom theme" from umd_plugin in volvox config crashes

#4641 cmdcolin closed 5 days ago
0
Fix RNA-seq stranded arc coloring, change the color of RNA-seq introns, and improve compact rendering

#4639 cmdcolin closed 2 weeks ago
0
Fix rendering of UCSC repeatmasker BigBed and BED files

#4638 cmdcolin closed 2 weeks ago
0
CRAM not lossless

#4637 alpapan closed 2 weeks ago
6
v2.16.1 release announcement

#4635 cmdcolin closed 2 weeks ago
0
Fix opening local files in the multi-wiggle add track selector on desktop

#4634 cmdcolin closed 2 weeks ago
0
Fix "Add track" select box not going away after selecting element

#4633 cmdcolin closed 2 weeks ago
1
Standardize modification colors between alignments track coverage and pileup subtracks

#4632 cmdcolin closed 3 weeks ago
0
Fix config description of assembly name ordering for synteny data adapters

#4631 cmdcolin closed 3 weeks ago
0
Fix MM tag modifications from particular BAM file failing to render on the negative strand

#4630 cmdcolin closed 3 weeks ago
0
Color by modifications option ignores BAM reverse reads

#4629 shaperones closed 3 weeks ago
5
Allow configuring Hi-C normalization and default resolution multiplier

#4628 cmdcolin closed 3 weeks ago
0
Create BLAST tabular adapter

#4627 garrettjstevens closed 2 weeks ago
4
Fix dark redraw on selected features after vertical resize of the synteny canvas

#4626 cmdcolin closed 3 weeks ago
1
Resizing synteny view vertically redraws mouseover without clearing screen

#4625 cmdcolin closed 3 weeks ago
0
Add utility links to synteny feature details to allow centering a view on a feature

#4624 cmdcolin closed 3 weeks ago
0
Add new row to multi-way synteny view

#4623 cmdcolin opened 4 weeks ago
0
Add --config argument to add-assembly CLI

#4622 cmdcolin opened 4 weeks ago
0
gz headers with rclone serve

#4621 alpapan closed 4 weeks ago
7
Add resolutionMultiplier config slot to BigWigAdapter

#4619 cmdcolin closed 3 weeks ago
2
Allow configuring default resolution for bigwig files

#4618 cmdcolin closed 3 weeks ago
1