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The pagination on the [helper tool](https://biocontainers.pro/#/multipackage) linked in the README is broken. After a search for a tool that has many versions there can be e.g. 2 pages of results (try…
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The version number for the parameters in the TOPPAS files isn't automatically updated. It's possible to do by hand (https://github.com/OpenMS/OpenMS/commit/fc0d8746ca915aed1e7b6f980bc986d378f531fc) bu…
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The implicit imports break code linting tools. Could this be changed to explicit imports?
https://github.com/OpenMS/OpenMS/blob/e4143aacf975dc1f7017aa91edb82c2ce95cd3ac/src/pyOpenMS/pyopenms/__init…
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Wondering if it would be possible/useful to annotate OpenMS tools (and formats) with terms from an ontology like
- http://edamontology.org
- https://www.psidev.info/groups/controlled-vocabularies…
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Dear OpenMS team. While trying to build support for the datatypes used in OpenMS into Galaxy (https://github.com/galaxyproject/galaxy/pull/8109) I could not find sufficient information on some of the …
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e.g.
```
src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: else if (accession == "MS:1000528") //lowest observed m/z
src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: spec_.setMet…
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@timosachsenberg , Oliver said you might have some Galaxy workflows that used the output of CTDConverter?
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Hi,
I wish to parse .mzData.xml files from Agilent to extract a RT x m/z matrix, I've correctly installed the mzR package but I obtain this issue: Error in .mzRBackendFromContent(x) :
Could not …
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Thirdparties:
- add compatible thirdparty executables to the THIRDPARTY repo.
- add a new subfolder and decide on a new naming scheme (maybe x86_64 and arm64)
- modify OpenMS CMake to look for subf…
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Is OpenMS 2.7 compatibile with KNIME 4.7.1? I am getting an error message that "Some of the OpenMS KNIME Nodes requirements might be missing".
*This issue was autogenerated by the Google Form for [Fe…