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### What would you like to see added in fMRIPrep?
I've come to the realization that maintaining ``--fs-no-reconall`` is costly, and more worryingly, provides a space for users to create different var…
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Based on a discussion with @Lestropie et al at the BIDS connectivity meeting:
Currently the common derivatives standard describes a distinction between "discrete" and "probabilistic" parcellations.…
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A lot of ROI generation (https://brainlife.io/app/5c54d89912cbcc01e1635aeb) Apps are failing for ABCD dataset with the following error message.
```
[33mWARNING: Warning reading tar header: Ignori…
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Find or generate open source functional connectivity that can be included and (importantly) distributed within the c-mariner package.
Requirements:
* 15-25 functional connectivity matrices compri…
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Would it be possible to limit the plugins that are shown so only the plugins compatible with the current atlas are available. For instance it is possible to select the 1um viewer when in the waxholm r…
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When in `_label.h5` creation, it requires `groundTruthLabel` as an argument to `dlt_extract_tract_feat.py` . I am facing trouble in finding how to create GroundTruthLabel, even after subject_specific_…
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Hi! When I try to run MCRIBReconAll on a dataset , the following error occurs:
File "/home/wangxiaomin/MCRIBS/bin/APARC2ASEGCSFRestoreDrawEM", line 46, in
NewASEGIMG[numpy.logical_and(ASEGIMG…
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As the GIF parecelllations we've used don't have a label for the hypothalamus, our current default mapping (#75) is to show the thalami.
Is there a way to manually highlight the region of interest…
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Hi @Lestropie
**Description**:
I encountered an error during the participant-level processing step using the MRtrix3 Connectome pipeline. The error suggests that the pipeline is unable to import t…
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#### Describe the problem
Dear all,
I would like to add a tutorial or example to [Frites](https://github.com/brainets/frites) to show how to link it to mne-python and mne-connectivity functionalitie…