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I think we need some simple tests of reading/writing ontologies with banana-rdf.
With the diesel DSL, we can write almost in literate fashion the official mapping of OWL2 Functional Syntax to RDF:
h…
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the package should provide more datasets from the living spreadshet (https://github.com/fdschneider/bexis_traits/issues/20).
- [x] identify data for integration
- [x] write script to extract data…
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* All Trait and phenotype patterns have a modifier. This may be phenotype, trait or children of these terms.
* Modifier: normal/abnormal has parent class phenotype (?) This replaces deviation(from …
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Could you please add these 2 terms. We need them for the Agronomy Ontology.
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Ontologies are increasingly borrowing terms from other ontologies and using the IDs from the source ontology, and the current tables of Chado make this difficult to represent. One example is the [P…
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We need automated testing!
GET for BrAPI v1.3 calls:
- [x] [BreedingMethods](https://brapi.docs.apiary.io/#reference/germplasm/breedingmethods/get-breedingmethods): #39
- [x] [Calls](https://brap…
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Definition:A qualitative trait describing presence of tendrils
Method:Visual observation of the presence and nature of tendrils
Scale:1 to 3 presence scale
Reference:The lentil botany, production and …
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suggested child of cooking or brewing quality [(TO:0000667](http://purl.obolibrary.org/obo/%28TO_0000667)) :
- baking quality
[CO_321:0000124](http://purl.obolibrary.org/obo/CO_321_0000124) - Measure…
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adding the terms
- [ ] age
- [ ] age class
- [ ] ife stage
- [ ] numeric age
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What is our strategy with regards to communicating scope? We are clearly focused on metazoa/vertebrates, but a small number of traits like
http://purl.obolibrary.org/obo/OBA_1000043
may cause co…