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We should consider adding a rule or two to automatically compute alpha diversity and maybe do some simple beta-diversity plots on all input samples, as that is often requested by people.
I'm think…
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https://erictopol.substack.com/p/a-new-variant-alert
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### Description of the bug
I can't make qiime2_tree pipeline to work due to "QIIME is caching your current deployment for improved performance. This may take a few moments and should only happen once…
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Hi as discussed yesterday
We can add a fastani clustering
What should be nice I think would be to make it such as it can guide users to choose one of the Phylogenetic tracks if they are uncertain …
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
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Dear all,
I am trying to run the following command to calculate PD (q=2) for just one sample (df = vector [1:1264]):
iNEXT.3D::AO3D(data=df,
diversity = "PD",
…
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```[tasklist]
### Multiple EG.5.1\* Lineages with S:L455F or S:L455S
- [x] [Branch 1](#branch_1): Designated as HK.8 via [cov-lineages/pango-designation@`9527e15`](https://github.com/cov-lineages/…
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微博内容精选
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Suggest to index interactions in the spider database -
Nearctic Spider Database. Nearctic Spider Database. Occurrence dataset https://doi.org/10.15468/6hui3t accessed via GBIF.org on 2021-03-03. S…