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Hi,
I've noticed that setting the subset-max-train argument on Percolator has a very large impact on PSM yield even when the number of PSMs in the dataset is much smaller than the value set in the …
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We have an example of one dataset converted in this PR:
https://github.com/bigbio/proteomics-metadata-standard/pull/541
Let us know what you think.
If ok, we can import 204 more datasets fro…
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Hi,
I am interested in running COSMOS with transcriptomics and phosphoproteomics data and I was wondering about the following:
1 - In the original use case of COSMOS, the PKN required a specific f…
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### Week 1 - Get to know the community
- [X] Join the communication channels
- [X] Open a GitHub issue (this one!)
- [x] Install the Ersilia Model Hub and test the simplest model
- [x] Write a motiva…
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🐞 **Describe the bug:**
Dear all,
I've been working on a research project consisting out of a microbiome data set and several metabolomics data sets. In this data set, I only have …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Nanostring-Biostats/SpatialOmicsOverlay
Confirm t…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/odisce/phenomis
Confirm the following by editing …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/SydneyBioX/scFeatures
Confirm the following by ed…
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Researchers need to be aware of which data are single-cell vs single-nucleus so that they can take special care to ensure proper integration.
Most contributors don't provide it automatically because …
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https://mp.weixin.qq.com/s/CHgDZo2VfPW4KVCzWx-Iyg
ixxmu updated
2 years ago