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Hi there,
I was trying to write my adata with `write_h5ad` but it threw an error as below.
Would you mind helping me fix this issue?
Thank you.
**My AnnData object:**
```
loo…
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https://mp.weixin.qq.com/s/Q7gMXEyfQll3ifAE3GZpNA
ixxmu updated
2 months ago
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Hello team!I hope this message finds you well.
I've encountered an issue while working with the zUMIs output files. It appears that there is no file named `gene_names.txt` included in the zUMIs outpu…
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**Submitting author:** @falexwolf (F. Alexander Wolf)
**Repository:** https://github.com/scverse/anndata
**Branch with paper.md** (empty if default branch): paper
**Version:** 0.10.9
**Editor:** @luiz…
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Dear umi tools team,
I've a bam file coming from Cel-Seq2 protocol, I'm trying to adapt it to run RNA velocity. To do that, I need to include a CB tag for the cell barcode and a UB tag for the UMI…
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Hello:
Could you please help me.
Initially I used kb ref and count, in kb-python 0.27.3, as described here:
https://www.kallistobus.tools/tutorials/kb_velocity/python/kb_velocity/
and ever…
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Hello,
First of all thanks for this pipeline, using it is nice.
I do however have a question, how can I modify the pipeline to keep the bam/sam files? I want to check RNA velocity but cant seem to…
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https://mp.weixin.qq.com/s/j4zezzyiNRhZGKisUWPQ7w
ixxmu updated
4 months ago
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The ingest board can be very slow to open, especially over slower network connections:
Is there too much data pushed over slow connections? Caching layer not working correctly?
Currently PROD H…