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Hello,
My name is Shweta Johari and I have analyzed the four tumors separately but that is not what is expected of me.
Hence, I would like to know how to integrate the four datasets.
These four tum…
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https://mp.weixin.qq.com/s/JKsph6l_9OzdqA_BAE7qWg
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Report from @khurrammaqbool; seems callers have gone missing again on the variant page. We've seen this on the RD side, but are tracking a current MIP issue for that as well so...
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In order for us to identify the most important genomics concepts and notions that will require standardization, we need to first know what questions we are trying to answer using this information.
…
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I am trying to run sarek on slurm , with the script,
#!/bin/bash
#SBATCH --qos=standard
#SBATCH --job-name=cd_301
#SBATCH --nodes=1
#SBATCH --tasks=2
#SBATCH --cpus-per-task=8
#SBATCH --tasks-p…
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https://mp.weixin.qq.com/s/NYnjfWPvjsQVlGnZlFxryg
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https://mp.weixin.qq.com/s/boDawuFSHqY_LuXLyPOYsg
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The introductory module is intended to review importing preprocessed data, followed by filtering and normalization. For simplicity, it seems logical that we might use the same dataset for the followin…
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BALSAMIC key features planned for the next relase( v10.0):
- [X] CNA for T/N WGS using Delly - KM (https://github.com/Clinical-Genomics/BALSAMIC/pull/947)
- Added: Delly CNV for tumor nor…
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## This section is required for PM/ADAPT team
### [Required] For what study (study_id) is this request?
### [Required] Basic study information
- [ ] Is this an OT or Kids First study…