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As you may have noticed, Hadoop-BAM has effectively dead-ended (https://github.com/HadoopGenomics/Hadoop-BAM/pull/203).
The community around Hadoop-BAM has moved new development to [Disq](https://g…
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I am looking for the MACS2 p-value signal for every base-pair, similar to the bigwigs available from [ROADMAP](https://egg2.wustl.edu/roadmap/data/byFileType/signal/consolidated/macs2signal/pval/) or …
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for example [https://purl.bdrc.io/graph/W2PD17450](https://purl.bdrc.io/graph/W2PD17450) exhibits:
```
bdr:MW2PD17450 bdo:instanceHasReproduction
bdr:W2PD17450 .
```
and
```
…
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When we receive an update from one entity, we need to sometimes update the links to this entity in other graphs. For instance if we have:
```
bdg:A {
bdr:A bdo:hasSon bdr:B .
}
bdg:B {
b…
eroux updated
4 years ago
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mymodule_lin: Unknown symbol netmap_bdg_ctl (err 0)
mymodule_lin: Unknown symbol netmap_bdg_learning (err 0)
These are the errors printed by "dmesg | tail"
I downloaded this repo, and in "mymod…
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I have some single-cell WGBS data I'm trying to read, but am having trouble with memory consumption.
There are 94 BGZIP compressed bedfiles between 4 and 500 KB each. The max CpG count among them is …
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Exported posts from WP site, extension gives this error immediately after clicking Create Local Data:
```
Warning: Invalid argument supplied for foreach() in /Users/Casemon/Sites/bdg.dev/packages/wor…
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Hi.
Fist of all, sorry for my bad english, I'm trying to improve it.
I don't know what I am doing wrong but I can't have any link in my results. Here are some peace of my work. Maybe you coult tell m…
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Hello,
I am trying to run SEACR with an IgG control. I get the error:
```
++ awk '{s+=$3-$2; t++}END{print s/(t*10)}' M5aetxQ1x2qc7.auc.threshold.bed
awk: cmd. line:1: fatal: division by zero …
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It is said in the document that users can use the example configuration file. But I didn't find it.
BTW, can capC-MAP generate .bw file as well? I know how to convert bdg to bw. If so, which bdg sh…