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Dear @rhancockn, @neurosutton, @bpinsard
@Remi-Gau and I are trying to get the HCPPipelines bids-app updated and tested again :)
We are currently running into the problem that the test data is …
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Dear sebastien,
Greetings.
I am using the singularity image to run CMP3 on cluster, and found error saying this for both parcBrainStem and parcHippo stage:
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220924-21:08:37,453 nipype.work…
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# BIDS Execution spec / BIDS Apps 2.0
## Project Description
I have the start of a draft here: https://docs.google.com/document/d/104HLZedFtx0TaXEUwd7eyWvJUlc0CcSUtCzwjNgmGxE/edit#heading=h.4k…
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I am trying to run the anatomical pipeline in ciftify using docker. I already have freesurfer output, but I am unable to get the code to run.
My folder structure is as follows:
- Raw data found u…
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docker run -ti --rm \
-v /Users/neurolab/Desktop/Pipeline_test3/:/data:ro \
-v /Users/neurolab/Desktop/Pipeline_test4:/out \
tigrlab/fmriprep_ciftify:latest /data /out participant --participant_lab…
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In principle the CMP works for Windows but there are problems concerning:
1) update user documentation to install CMP on Windows
2) CMP commandline docker integration
2.1 os.geteuid needs to b…
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It is very inefficient and it would cause fragmentation if BIDScoin's bidsapps would all be distributed as separate apps. A better alternative would be to group them all under the `bidscoin` umbrella,…
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Hi, intrepid user here. Running through the 'walkthrough'; in the 'containers-run' step I get the following error:
> (base) kennedyd@MCSMLS065401 ds000003-qc % datalad containers-run \
> …
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Something seems to have broken, I can no longer run any wet or dry runs. This seems to be true whether in singularity or local build.
The only things I can think of are that a dependency broke, or …
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### Prerequisites
- [X] I am using [the latest version of Locust](https://github.com/locustio/locust/releases/)
- [X] I am reporting a bug, not asking a question
### Description
When I used the V1.…