-
Hi !
I am trying tu use msCENTIPEDE to generate TF footprints for several ATAC-seq data sets i've produced.
I wanted to have general advices on how to achieve the most accurate workflow.
So far, w…
-
Hello,
I identified A and B compartments in my data at three resolutions (10Kb, 100Kb and 1Mb):
'''
fanc compartments -g $CHROMS_PATH -d $DOMAIN_OUTPUT $FILE -x $CHROMS2EXCLUDE
'''
I am a b…
-
RIS files with numeric `LB` field fail on search and review. ASReview classification value is filled with those LB values. Because they are not `0` or `1`, items are handled incorrectly in the prior k…
-
Hi AMULET team,
Thank you so much for developing this great method first! So sorry that I am quite new to this area and have some basic questions.
I noticed that in the multiplet detection…
-
Sorting by `projectDescription` fails to properly sort all results.
```
$ http 'https://service.azul.data.humancellatlas.org/index/projects?size=30&catalog=dcp37&order=asc&sort=projectDescription&…
-
-
-
So far there's a demo for training on test set, but not for using a trained model on new data.
-
Hi
When performing the analysis of finding m6A in DNA using alternative model with the default values the methylation rates are too high, for the control ones which were pcr products causing misstru…
-
**Is your feature request related to a problem? Please describe.**
Markup in title and abstract often have an important meaning. Scientists care about them being displayed correctly.
Markup could be…