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The following Python code was returning accurate results for several months. In tests with results showing up properly on craigslist, the library is returning 0 results using the same query.
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Hi，
I installed version 5.0.0 successfully and run without error. However, the entropy values of all CpG sites were negative. Was this normal?
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Metheor only calculate methylation diversity based on CpG site？
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Hi,
after today's release of Pyface 7.4.0 which is the first version supporting PySide6, I tried this out on my MacBook with an M1 CPU. PySide6 / Qt 6 is the only version supported natively on M1 c…
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Our core use case for the plugin is to put recipes on small CPG brand sites that are showing recipes explicitly made using their products. The existing taxonomies really can't be repurposed for this v…
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Elevated mutation rates at CpG dinucleotides are one of the major contributors to mutation rate variation in mammals. These can't easily be simulated by `sim_mutations`, but there are probably reasona…
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Hello @ArtRand,
Thank you for your tool, It helps me a lot,
I have a couple of questions related to the DMR score when I am trying to find the DMR (TSS regions provided by a bed file) in 2 samples w…
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Hi I would like to know if all CpG are reported in the modkit pileup if we specify no-filtering ? Even those that are not methylated ?
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Hi, thanks for developing and maintaining such an excellent tool.
I am trying to use TensorQTL to analyze some methylation data. I'm thinking of taking a similar strategy as eQTL and sQTL, where a …
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As noted in point 1 here: https://github.com/broadinstitute/tensorqtl/issues/68
> there will be >400K CpG sites in the data compared to >20K genes. What would you suggest be a good cis_window for a…