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As we consider what the must-haves and nice-to-haves are for a CRISPR-Cas kit: should we be providing an expression device/plasmid for gRNA paired with a particular Cas? This may all be moot if we wan…
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Please add CRISPRfinder for CRISPR/Cas typing and Phigaro (version 0.2.1.7) for prophage identification in bacterial genomes.
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Hello,
I would like to use PROGEN2 package to generate CAS (CRISPR -CAS) family of proteins. How can I use sample.py for this?
The paper says that PROGEN2 generates sequences in controlled fashion…
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CRISPR systems are classified into types based on which *cas* genes they have. The current [classification system](http://dx.doi.org/10.1038/nrmicro3569) (ping me for pdf) divides CRISPR systems into …
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Read all comments on this topic in #16298 before commenting. I think this is the immediate course of action agreed upon (in 2018!) on that ticket.
Immediate course of action:
1. Remove is_a lin…
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I noticed that older packages, e.g. CRISPR-Cas, have a previous version of the excel file, where some features are missing (e.g. local sequence file option in Data Source Prefix).
All we'd need to …
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This happened when @GC-repeat tried to import two Cas9 nickases in the CRISPR-Cas package.
Although everything was in order and several parts were already in the Cas variants library, the newly ad…
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CRISPR-finder for finding repeats: http://crispr.i2bc.paris-saclay.fr/Server/
PHASTER for finding the proteins: http://phaster.ca/
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#### Käsitteen tyyppi
CONCEPT
#### Ehdotettu termi suomeksi
CRISPR/Cas9
#### Perustelut ehdotukselle
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#### Aineisto jonka kuvailussa käsitettä tarvitaan (esim. nimeke tai URL)
G…
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Ok. So the issue was in fact with the "(" not with the ".". This is actually preferable because for these particular parts it was not too big of a deal to remove the "(".
_Originally posted by @eth…