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Hi.
Please can you help me of how to use /tmp directory to avoid disk space.
I saw the related issues but I am not sure at what stage should I put the command for deleting the temp files.
**1. Wh…
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Hello, I have a problem with couple of samples using the latest v13 executable and db.
```
[W::hts_idx_load3] The index file is older than the data file: lq/hiphase/zzz/zzz.aligned.haplotagged.bam…
hudja updated
3 weeks ago
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After testing `setParameterValuesByPath` with option `stopIfNotFound=FALSE` for Reporting Engine issue [#497](https://github.com/Open-Systems-Pharmacology/OSPSuite.ReportingEngine/issues/497), there w…
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**Describe the solution you'd like**
Hi,
Do you have specific plans to add WES support? Can you tell us about any dates when to expect it?
Best, Anna
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Currently only uses Official Symbol for genes. Could integrate with PharmGKB or dbSNP/other NIH project to provide other gene names?
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We need a enable the search of variants in the OpenTargets platform search.
## Background
It should be possible to search on
- variant id (chr_pos_ref_alt)
- search on exact ”chr_pos_” …
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* **Do you want to request a *feature* or report a *bug*?**
Bug
* **What is the current behavior?**
Annotate step will not accept triploid genotypes
* **If the current behavior is a bu…
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```
At the moment, the ontology assumes that there are two copies of each allele.
This is not necessarily the case for some pharmacogenetic alleles, where copy
number variation is relatively common …
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```
At the moment, the ontology assumes that there are two copies of each allele.
This is not necessarily the case for some pharmacogenetic alleles, where copy
number variation is relatively common …
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Hi,
Thank you for a great tool!
My question is, in one of my samples there are two deletions near each other. One is ~2847bp and other is ~12150bp (one copy of CYP2D6 gene deletion). These two d…