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Would this process be able to detect partial tandem duplications in KMT2A if I add to the database? For example, the breakpoint might be between somewhere on ex9 and somewhere on ex3 (you basically h…
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Hi,
I tried to run TEtrimmer with the test set, using the command:
**TEtrimmer --input_file test_input.fa --genome_file test_genome.fasta --output_dir test_output --num_threads 20 --classify_all…
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Problem : Have to copy/move/sync from a GDrive source with duplications, but not granted to modify that source, so you cannot dedupe.
On log file appears "Duplicate object found in source - ignorin…
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## 🚀 Feature Proposal
Ability to reuse a test from another project.
## Motivation
Currently a test can only be reused in the same project. Inter-project test reuse allows users to develop te…
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To be able to detect rate shifts following duplications we must be able to distinguish these from speciation events. The speciation events we try to place in time (by fossil calibration), the duplicat…
rvosa updated
8 years ago
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Hi Heng,
Always interested to test out new software that you put out. I am doing a lot of targeted resequencing with Illumina TruSight Amplicon data of tumour-only samples. I have been looking for so…
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hello! using svim alignment to genotype, all the tandem duplications show missing value.
1. generated simulated data by VISOR LASeR, here is my input:
1 122200 125000 tandem duplication 2 10
1 126…
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Hi,
Can `EagleC` add a parameter to detect several type SVs? INS/DEL is very abudance in the plant genome, but HiC may have higher power to detect inversion or translocation. These two types shoul…
baozg updated
2 years ago
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Does `last` have the ability to efficiently compute self-alignments? `lastz` has a mode specifically for this, but I was hoping to be able to replicate that more rapidly with `last`.
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I've got the following WSDL spec which fails to compile with
gensrc/oil/salesorderv201901/definitions/ProductLineItemUpdateOrderRequest.ts:1:33 - error TS1149: File name 'gensrc/oil/salesorderv201…