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Hi,
I ran the ```dna_r10.4.1_e8.2_400bps_sup@v5.0.0_4mC_5mC@v2``` modified model from Dorado. And I use modkit to generate the bed file including 4mC and 5mC positions using this command:
```
mod…
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Hello @ArtRand,
Thank you for your tool, It helps me a lot,
I have a couple of questions related to the DMR score when I am trying to find the DMR (TSS regions provided by a bed file) in 2 samples w…
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### The problem
I was working on a new automation tonight to pop up my security camera video stream on my living room Samsung TV when a camera detects motion. In doing my beta testing, DLNA would not…
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I have mapped reads on my genome. I used modkit pileup and dmr pair using the IVT sample. If I sub-sample these reads and re-run modkit pileup and then dmr I get strange valid_coverage. For example, f…
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Hello @ArtRand ,
I would like to compare the methylations of 2 conditions by regions and not by a specific position.
In the `modkit dmr pair` what should be the input for the `--segments` parame…
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I do the majority of my work on a remote HPC where I don't have superuser privileges and I am often limited in the ability to download or install software from urls. I installed comb-p in a custom con…
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### Description
From a recent conversation we had, it is pretty clear that OPeNDAP has developed, through the many years working with NASA, expertise in providing access to:
1. HDF files on …
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The DMR++ parser was merged in #133, but there are a few ways it could be improved.
1. Docs. It's not actually listed anywhere publicly that DMR++ files are supported, not even in the docstring of …
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Как получить пригодное для декодирования видео с SONY DMR-2000? Пробовал разные карты и программы, но пока безуспешно.
Если этот инструмент с Ffmpeg еще не реализован в программе, как это сделать? Ка…
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We are testing EPICv2 analysis using RnBeads. The versions we used are RnBeads v2.22.0 and RnBeads.hg38 v1.36.0.
rnb.run.import(), rnb.run.qc(), rnb.run.preprocessing, rnb.run.exploratory(), rnb.run.…